Package utility

package utility

Contains helper classes and functions that perform common operations such as file handling, data processing, and other reusable utilities to support the application's functionality.

Class	Description
CLI	Command Line Interface (CLI) utility class for parsing and validating command-line arguments.
Constants	A utility class that holds constant values used throughout the project.
IO	Utility class for input/output operations.
Logging	Logging utility class for printing messages to the console with different severity levels.
OS	Utility class for operating system-related functionalities.
SequenceOperations	Utility class for performing various sequence operations.
SequenceOperations.MarginalGaps	Enum to store different modes to handle prefix gaps for global sequence alignment.
Validation	Utility class for performing various validation checks.