Package main

Class Musial.View

java.lang.Object
main.Musial.View
Enclosing class:
Musial
public static class Musial.View extends Object
Provides functionality to generate and display various types of tables based on the data stored in the `Storage` object.

Supports filtering and formatting the output for different content types such as features, alleles, samples, and variants, as well as sequence types and variant calls per sample in a matrix format.

  • Field Details

    • content

      public static final Set<String> content
      A set of supported content types for the `view` task.

      This set defines the types of data that can be generated and displayed in tabular format by the `view` functionality of the MUSIAL application. Each string in the set corresponds to a specific type of content:

      • feature: Represents genomic features.
      • allele: Represents alleles associated with features.
      • sample: Represents sample-specific data.
      • type: Represents sequence types for samples.
      • variant: Represents genomic variants.
      • call: Represents variant calls for samples.

  • Constructor Details

    • View

      public View()